Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm9987-201ENSMUST00000069768 567 ntBASIC18.82■□□□□ 0.6
Ybx1P62960 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
Ybx1P62960 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ybx1P62960 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.81■□□□□ 0.6
Ybx1P62960 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.81■□□□□ 0.6
Ybx1P62960 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx1P62960 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ybx1P62960 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Ybx1P62960 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.8■□□□□ 0.6
Ybx1P62960 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Ybx1P62960 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.8■□□□□ 0.6
Ybx1P62960 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx1P62960 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ybx1P62960 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ybx1P62960 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ybx1P62960 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.79■□□□□ 0.6
Ybx1P62960 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.79■□□□□ 0.6
Ybx1P62960 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx1P62960 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Gm5417-201ENSMUST00000079706 384 ntBASIC18.78■□□□□ 0.6
Ybx1P62960 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx1P62960 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.78■□□□□ 0.6
Ybx1P62960 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ybx1P62960 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ybx1P62960 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Ybx1P62960 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ybx1P62960 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ybx1P62960 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx1P62960 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Ybx1P62960 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ybx1P62960 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ybx1P62960 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ybx1P62960 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ybx1P62960 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.77■□□□□ 0.59
Ybx1P62960 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Ybx1P62960 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ybx1P62960 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms