Protein–RNA interactions for Protein: P62334

Psmc6, 26S proteasome regulatory subunit 10B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc6P62334 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Psmc6P62334 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Psmc6P62334 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc6P62334 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Gm715-201ENSMUST00000117865 831 ntBASIC20.56■□□□□ 0.88
Psmc6P62334 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.56■□□□□ 0.88
Psmc6P62334 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.56■□□□□ 0.88
Psmc6P62334 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Psmc6P62334 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Psmc6P62334 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc6P62334 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Psmc6P62334 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Psmc6P62334 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Psmc6P62334 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Psmc6P62334 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc6P62334 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.54■□□□□ 0.88
Psmc6P62334 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Gm13836-201ENSMUST00000121159 501 ntBASIC20.54■□□□□ 0.88
Psmc6P62334 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Psmc6P62334 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.54■□□□□ 0.88
Psmc6P62334 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Psmc6P62334 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc6P62334 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.53■□□□□ 0.88
Psmc6P62334 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Psmc6P62334 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Psmc6P62334 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.53■□□□□ 0.88
Psmc6P62334 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.53■□□□□ 0.88
Psmc6P62334 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.53■□□□□ 0.88
Psmc6P62334 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Psmc6P62334 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Psmc6P62334 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Psmc6P62334 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Psmc6P62334 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.52■□□□□ 0.88
Psmc6P62334 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Psmc6P62334 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Psmc6P62334 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Psmc6P62334 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Psmc6P62334 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.52■□□□□ 0.88
Psmc6P62334 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Psmc6P62334 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Psmc6P62334 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Psmc6P62334 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.51■□□□□ 0.87
Psmc6P62334 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.51■□□□□ 0.87
Psmc6P62334 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Gm18666-201ENSMUST00000190039 958 ntBASIC20.51■□□□□ 0.87
Psmc6P62334 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.51■□□□□ 0.87
Psmc6P62334 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Psmc6P62334 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Psmc6P62334 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.5■□□□□ 0.87
Psmc6P62334 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Psmc6P62334 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Psmc6P62334 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Psmc6P62334 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Psmc6P62334 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Psmc6P62334 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms