Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm10849-201ENSMUST00000100397 618 ntBASIC16.06■□□□□ 0.16
Lsm6P62313 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm6P62313 Gm8495-201ENSMUST00000188740 694 ntBASIC16.06■□□□□ 0.16
Lsm6P62313 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.06■□□□□ 0.16
Lsm6P62313 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm6P62313 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm6P62313 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lsm6P62313 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm6P62313 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.05■□□□□ 0.16
Lsm6P62313 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm6P62313 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm6P62313 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Lsm6P62313 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm6P62313 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.05■□□□□ 0.16
Lsm6P62313 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm6P62313 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm6P62313 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm6P62313 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.04■□□□□ 0.16
Lsm6P62313 Gm22325-201ENSMUST00000158904 308 ntBASIC16.04■□□□□ 0.16
Lsm6P62313 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lsm6P62313 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lsm6P62313 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm6P62313 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.04■□□□□ 0.16
Lsm6P62313 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.03■□□□□ 0.16
Lsm6P62313 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsm6P62313 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lsm6P62313 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.03■□□□□ 0.16
Lsm6P62313 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.03■□□□□ 0.16
Lsm6P62313 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Lsm6P62313 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm6P62313 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.03■□□□□ 0.16
Lsm6P62313 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm6P62313 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm6P62313 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.02■□□□□ 0.16
Lsm6P62313 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.02■□□□□ 0.16
Lsm6P62313 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm6P62313 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm6P62313 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm6P62313 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.01■□□□□ 0.15
Lsm6P62313 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lsm6P62313 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.01■□□□□ 0.15
Lsm6P62313 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.01■□□□□ 0.15
Lsm6P62313 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lsm6P62313 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm6P62313 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lsm6P62313 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Lsm6P62313 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm6P62313 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm6P62313 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm6P62313 Gm26571-201ENSMUST00000181399 666 ntBASIC16■□□□□ 0.15
Lsm6P62313 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16■□□□□ 0.15
Lsm6P62313 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm6P62313 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm6P62313 Gm35558-201ENSMUST00000222675 2219 ntBASIC16■□□□□ 0.15
Lsm6P62313 Gm38308-201ENSMUST00000194934 1809 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms