Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.48□□□□□ -0.09
Rab4aP56371 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rab4aP56371 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab4aP56371 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rab4aP56371 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Gm14523-201ENSMUST00000117260 558 ntBASIC14.47□□□□□ -0.09
Rab4aP56371 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rab4aP56371 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rab4aP56371 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rab4aP56371 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.46□□□□□ -0.09
Rab4aP56371 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rab4aP56371 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Gm27502-201ENSMUST00000183495 199 ntBASIC14.46□□□□□ -0.09
Rab4aP56371 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.46□□□□□ -0.09
Rab4aP56371 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rab4aP56371 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab4aP56371 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rab4aP56371 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rab4aP56371 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rab4aP56371 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rab4aP56371 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rab4aP56371 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rab4aP56371 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.45□□□□□ -0.1
Rab4aP56371 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.45□□□□□ -0.1
Rab4aP56371 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rab4aP56371 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.45□□□□□ -0.1
Rab4aP56371 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rab4aP56371 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rab4aP56371 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rab4aP56371 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.44□□□□□ -0.1
Rab4aP56371 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rab4aP56371 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rab4aP56371 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rab4aP56371 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab4aP56371 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab4aP56371 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab4aP56371 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab4aP56371 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rab4aP56371 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms