Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NrlP54846 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NrlP54846 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NrlP54846 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NrlP54846 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NrlP54846 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NrlP54846 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NrlP54846 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.48■□□□□ 0.71
NrlP54846 Gm11927-201ENSMUST00000118472 759 ntBASIC19.48■□□□□ 0.71
NrlP54846 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.48■□□□□ 0.71
NrlP54846 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NrlP54846 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NrlP54846 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.48■□□□□ 0.71
NrlP54846 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.48■□□□□ 0.71
NrlP54846 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NrlP54846 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NrlP54846 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
NrlP54846 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NrlP54846 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.47■□□□□ 0.71
NrlP54846 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NrlP54846 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NrlP54846 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.46■□□□□ 0.71
NrlP54846 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NrlP54846 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.45■□□□□ 0.7
NrlP54846 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NrlP54846 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NrlP54846 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.45■□□□□ 0.7
NrlP54846 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NrlP54846 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NrlP54846 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NrlP54846 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NrlP54846 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NrlP54846 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NrlP54846 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NrlP54846 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NrlP54846 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.44■□□□□ 0.7
NrlP54846 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.44■□□□□ 0.7
NrlP54846 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NrlP54846 Golph3-205ENSMUST00000228671 2842 ntBASIC19.44■□□□□ 0.7
NrlP54846 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms