Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.96■□□□□ 0.79
Ccr1P51675 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccr1P51675 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ccr1P51675 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccr1P51675 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccr1P51675 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccr1P51675 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccr1P51675 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccr1P51675 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.95■□□□□ 0.78
Ccr1P51675 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.95■□□□□ 0.78
Ccr1P51675 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.95■□□□□ 0.78
Ccr1P51675 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccr1P51675 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr1P51675 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ccr1P51675 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccr1P51675 Mir6982-201ENSMUST00000184354 68 ntBASIC19.94■□□□□ 0.78
Ccr1P51675 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccr1P51675 Gm38285-201ENSMUST00000192928 922 ntBASIC19.94■□□□□ 0.78
Ccr1P51675 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr1P51675 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ccr1P51675 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ccr1P51675 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccr1P51675 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccr1P51675 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.93■□□□□ 0.78
Ccr1P51675 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccr1P51675 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccr1P51675 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr1P51675 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.92■□□□□ 0.78
Ccr1P51675 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.92■□□□□ 0.78
Ccr1P51675 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccr1P51675 BC021767-201ENSMUST00000126387 1716 ntBASIC19.92■□□□□ 0.78
Ccr1P51675 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccr1P51675 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr1P51675 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccr1P51675 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccr1P51675 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.91■□□□□ 0.78
Ccr1P51675 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccr1P51675 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Gm10138-203ENSMUST00000206952 366 ntBASIC19.9■□□□□ 0.78
Ccr1P51675 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccr1P51675 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr1P51675 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Ccr1P51675 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr1P51675 Mir1199-201ENSMUST00000117015 119 ntBASIC19.89■□□□□ 0.77
Ccr1P51675 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr1P51675 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms