Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Mmp13P33435 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp13P33435 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.73■□□□□ 0.59
Mmp13P33435 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp13P33435 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp13P33435 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp13P33435 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Mmp13P33435 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.73■□□□□ 0.59
Mmp13P33435 AV356131-201ENSMUST00000206201 750 ntBASIC18.73■□□□□ 0.59
Mmp13P33435 Gm10033-202ENSMUST00000211874 928 ntBASIC18.73■□□□□ 0.59
Mmp13P33435 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mmp13P33435 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp13P33435 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.73■□□□□ 0.59
Mmp13P33435 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.72■□□□□ 0.59
Mmp13P33435 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.72■□□□□ 0.59
Mmp13P33435 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.72■□□□□ 0.59
Mmp13P33435 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Mmp13P33435 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp13P33435 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.71■□□□□ 0.59
Mmp13P33435 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.71■□□□□ 0.59
Mmp13P33435 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.71■□□□□ 0.59
Mmp13P33435 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.71■□□□□ 0.59
Mmp13P33435 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Mmp13P33435 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp13P33435 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp13P33435 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp13P33435 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.71■□□□□ 0.59
Mmp13P33435 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mmp13P33435 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.7■□□□□ 0.58
Mmp13P33435 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.7■□□□□ 0.58
Mmp13P33435 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Mmp13P33435 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Mmp13P33435 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp13P33435 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.7■□□□□ 0.58
Mmp13P33435 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp13P33435 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Mmp13P33435 Gm7291-201ENSMUST00000199147 382 ntBASIC18.69■□□□□ 0.58
Mmp13P33435 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.69■□□□□ 0.58
Mmp13P33435 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.69■□□□□ 0.58
Mmp13P33435 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp13P33435 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Gm27405-201ENSMUST00000184201 112 ntBASIC18.68■□□□□ 0.58
Mmp13P33435 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.68■□□□□ 0.58
Mmp13P33435 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.68■□□□□ 0.58
Mmp13P33435 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp13P33435 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp13P33435 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp13P33435 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mmp13P33435 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms