Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl6P27784 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.29□□□□□ -0.12
Ccl6P27784 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccl6P27784 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccl6P27784 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccl6P27784 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Ccl6P27784 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl6P27784 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl6P27784 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccl6P27784 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.27□□□□□ -0.12
Ccl6P27784 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccl6P27784 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl6P27784 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.27□□□□□ -0.13
Ccl6P27784 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ccl6P27784 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl6P27784 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl6P27784 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.26□□□□□ -0.13
Ccl6P27784 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ccl6P27784 Gm15039-201ENSMUST00000118914 875 ntBASIC14.26□□□□□ -0.13
Ccl6P27784 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccl6P27784 Gm10033-202ENSMUST00000211874 928 ntBASIC14.26□□□□□ -0.13
Ccl6P27784 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl6P27784 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl6P27784 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.26□□□□□ -0.13
Ccl6P27784 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl6P27784 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.26□□□□□ -0.13
Ccl6P27784 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccl6P27784 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Nespas-201ENSMUST00000143738 1083 ntBASIC14.25□□□□□ -0.13
Ccl6P27784 Gm18284-201ENSMUST00000172604 624 ntBASIC14.25□□□□□ -0.13
Ccl6P27784 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Ccl6P27784 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccl6P27784 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccl6P27784 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccl6P27784 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.25□□□□□ -0.13
Ccl6P27784 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl6P27784 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms