Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.21■□□□□ 0.35
Col4a2P08122 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Col4a2P08122 Gm7889-201ENSMUST00000185591 958 ntBASIC17.21■□□□□ 0.35
Col4a2P08122 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.21■□□□□ 0.35
Col4a2P08122 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a2P08122 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Col4a2P08122 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.2■□□□□ 0.34
Col4a2P08122 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Gm15375-201ENSMUST00000119510 849 ntBASIC17.2■□□□□ 0.34
Col4a2P08122 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Gm30025-201ENSMUST00000218555 728 ntBASIC17.2■□□□□ 0.34
Col4a2P08122 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Col4a2P08122 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col4a2P08122 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.19■□□□□ 0.34
Col4a2P08122 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.19■□□□□ 0.34
Col4a2P08122 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a2P08122 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col4a2P08122 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a2P08122 Gm12382-201ENSMUST00000122005 922 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.18■□□□□ 0.34
Col4a2P08122 Gm10138-203ENSMUST00000206952 366 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Odf3b-204ENSMUST00000227834 930 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Mtag2-201ENSMUST00000058665 714 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a2P08122 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a2P08122 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a2P08122 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a2P08122 Timm23-208ENSMUST00000226683 750 ntBASIC17.18■□□□□ 0.34
Col4a2P08122 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col4a2P08122 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col4a2P08122 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a2P08122 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.17■□□□□ 0.34
Col4a2P08122 Gm11539-201ENSMUST00000119837 557 ntBASIC17.17■□□□□ 0.34
Col4a2P08122 Gm13436-201ENSMUST00000120418 567 ntBASIC17.17■□□□□ 0.34
Col4a2P08122 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.17■□□□□ 0.34
Col4a2P08122 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.17■□□□□ 0.34
Col4a2P08122 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col4a2P08122 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.17■□□□□ 0.34
Col4a2P08122 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a2P08122 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a2P08122 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a2P08122 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Gm13559-201ENSMUST00000120476 863 ntBASIC17.16■□□□□ 0.34
Col4a2P08122 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Gm43183-201ENSMUST00000200632 547 ntBASIC17.16■□□□□ 0.34
Col4a2P08122 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.16■□□□□ 0.34
Col4a2P08122 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a2P08122 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a2P08122 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms