Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.49■□□□□ 0.55
PdgfrbP05622 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.49■□□□□ 0.55
PdgfrbP05622 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PdgfrbP05622 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PdgfrbP05622 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PdgfrbP05622 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.48■□□□□ 0.55
PdgfrbP05622 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PdgfrbP05622 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PdgfrbP05622 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PdgfrbP05622 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PdgfrbP05622 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PdgfrbP05622 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PdgfrbP05622 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.47■□□□□ 0.55
PdgfrbP05622 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PdgfrbP05622 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PdgfrbP05622 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PdgfrbP05622 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PdgfrbP05622 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Gm37179-201ENSMUST00000194862 823 ntBASIC18.46■□□□□ 0.55
PdgfrbP05622 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.46■□□□□ 0.55
PdgfrbP05622 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PdgfrbP05622 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PdgfrbP05622 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.45■□□□□ 0.54
PdgfrbP05622 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
PdgfrbP05622 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PdgfrbP05622 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.45■□□□□ 0.54
PdgfrbP05622 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.45■□□□□ 0.54
PdgfrbP05622 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.45■□□□□ 0.54
PdgfrbP05622 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PdgfrbP05622 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PdgfrbP05622 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.44■□□□□ 0.54
PdgfrbP05622 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.44■□□□□ 0.54
PdgfrbP05622 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PdgfrbP05622 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PdgfrbP05622 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PdgfrbP05622 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PdgfrbP05622 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.43■□□□□ 0.54
PdgfrbP05622 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PdgfrbP05622 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.43■□□□□ 0.54
PdgfrbP05622 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.43■□□□□ 0.54
PdgfrbP05622 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PdgfrbP05622 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms