Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hcn1O88704 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn1O88704 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn1O88704 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn1O88704 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn1O88704 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn1O88704 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Gm37179-201ENSMUST00000194862 823 ntBASIC17.51■□□□□ 0.39
Hcn1O88704 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.51■□□□□ 0.39
Hcn1O88704 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn1O88704 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
Hcn1O88704 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hcn1O88704 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hcn1O88704 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.5■□□□□ 0.39
Hcn1O88704 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn1O88704 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hcn1O88704 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hcn1O88704 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Hcn1O88704 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hcn1O88704 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.49■□□□□ 0.39
Hcn1O88704 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hcn1O88704 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn1O88704 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hcn1O88704 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hcn1O88704 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Hcn1O88704 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hcn1O88704 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hcn1O88704 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hcn1O88704 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Hcn1O88704 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hcn1O88704 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn1O88704 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hcn1O88704 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.47■□□□□ 0.39
Hcn1O88704 Gm13534-201ENSMUST00000121169 513 ntBASIC17.47■□□□□ 0.39
Hcn1O88704 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.47■□□□□ 0.39
Hcn1O88704 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.47■□□□□ 0.39
Hcn1O88704 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Hcn1O88704 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.47■□□□□ 0.39
Hcn1O88704 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hcn1O88704 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.47■□□□□ 0.39
Hcn1O88704 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.46■□□□□ 0.39
Hcn1O88704 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hcn1O88704 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.46■□□□□ 0.39
Hcn1O88704 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.46■□□□□ 0.39
Hcn1O88704 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hcn1O88704 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms