Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
Hps1O08983 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hps1O08983 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Hps1O08983 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Hps1O08983 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hps1O08983 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Hps1O08983 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hps1O08983 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hps1O08983 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Gm10602-201ENSMUST00000098239 609 ntBASIC16.95■□□□□ 0.3
Hps1O08983 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.95■□□□□ 0.3
Hps1O08983 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Hps1O08983 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hps1O08983 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hps1O08983 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.95■□□□□ 0.3
Hps1O08983 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hps1O08983 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Hps1O08983 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 AV356131-201ENSMUST00000206201 750 ntBASIC16.94■□□□□ 0.3
Hps1O08983 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hps1O08983 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.94■□□□□ 0.3
Hps1O08983 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hps1O08983 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 BC021767-201ENSMUST00000126387 1716 ntBASIC16.93■□□□□ 0.3
Hps1O08983 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hps1O08983 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.93■□□□□ 0.3
Hps1O08983 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.93■□□□□ 0.3
Hps1O08983 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.93■□□□□ 0.3
Hps1O08983 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Hps1O08983 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hps1O08983 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Hps1O08983 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.92■□□□□ 0.3
Hps1O08983 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
Hps1O08983 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.92■□□□□ 0.3
Hps1O08983 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Hps1O08983 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hps1O08983 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.91■□□□□ 0.3
Hps1O08983 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hps1O08983 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.91■□□□□ 0.3
Hps1O08983 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hps1O08983 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms