Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna9G3X8Z7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Chrna9G3X8Z7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna9G3X8Z7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna9G3X8Z7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Gm7514-201ENSMUST00000209475 934 ntBASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna9G3X8Z7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna9G3X8Z7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chrna9G3X8Z7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna9G3X8Z7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms