Protein–RNA interactions for Protein: E9Q3A7

Cdh19, Cadherin 19, type 2, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh19E9Q3A7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cdh19E9Q3A7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh19E9Q3A7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cdh19E9Q3A7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cdh19E9Q3A7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh19E9Q3A7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cdh19E9Q3A7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh19E9Q3A7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh19E9Q3A7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh19E9Q3A7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh19E9Q3A7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh19E9Q3A7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms