Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx6-2D3Z4R4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Haglr-201ENSMUST00000100000 2085 ntBASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx6-2D3Z4R4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx6-2D3Z4R4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx6-2D3Z4R4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Nkx6-2D3Z4R4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-2D3Z4R4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-2D3Z4R4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-2D3Z4R4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-2D3Z4R4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms