Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gm12887B1AVM1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gm12887B1AVM1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm12887B1AVM1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm12887B1AVM1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.83□□□□□ -0.04
Gm12887B1AVM1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Gm15820-201ENSMUST00000201566 728 ntBASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm12887B1AVM1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.81□□□□□ -0.04
Gm12887B1AVM1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm12887B1AVM1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms