Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.17■□□□□ 0.98
CAPN8A6NHC0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN8A6NHC0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN8A6NHC0 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
CAPN8A6NHC0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN8A6NHC0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN8A6NHC0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CAPN8A6NHC0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 AC026310.3-201ENST00000625186 2373 ntBASIC21.13■□□□□ 0.97
CAPN8A6NHC0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 AC137761.2-201ENST00000561729 223 ntBASIC21.13■□□□□ 0.97
CAPN8A6NHC0 AC145350.3-201ENST00000569033 163 ntBASIC21.13■□□□□ 0.97
CAPN8A6NHC0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN8A6NHC0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 AL121603.2-201ENST00000557373 2117 ntBASIC21.12■□□□□ 0.97
CAPN8A6NHC0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN8A6NHC0 AC008175.2-201ENST00000612840 297 ntBASIC21.12■□□□□ 0.97
CAPN8A6NHC0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms