Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12-1A0N8R1 Fst-202ENSMUST00000223640 2612 ntBASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav12-1A0N8R1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav12-1A0N8R1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-1A0N8R1 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-1A0N8R1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Gm43017-201ENSMUST00000198296 752 ntBASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Gm43060-201ENSMUST00000200621 289 ntBASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav12-1A0N8R1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms