Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Serp2-204ENSMUST00000228055 705 ntBASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-3A0A0B4J1K1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4-3A0A0B4J1K1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm10232-201ENSMUST00000089221 720 ntBASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4-3A0A0B4J1K1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm12366-201ENSMUST00000121722 873 ntBASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Gm5786-201ENSMUST00000085368 882 ntBASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-3A0A0B4J1K1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms