Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm29257-201ENSMUST00000186115 639 ntBASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbc1A0A0A6YWV4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm6211-202ENSMUST00000167849 925 ntBASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbc1A0A0A6YWV4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbc1A0A0A6YWV4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
Trbc1A0A0A6YWV4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trbc1A0A0A6YWV4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbc1A0A0A6YWV4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbc1A0A0A6YWV4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbc1A0A0A6YWV4 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms