Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Gm42778-201ENSMUST00000199644 553 ntBASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav9d-3A0A075B695 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-3A0A075B695 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-3A0A075B695 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Gm13234-201ENSMUST00000120010 747 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms