Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.91□□□□□ -0.82
Usp47Q8BY87 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp47Q8BY87 AC135119.1-202ENSMUST00000228435 2203 ntBASIC9.91□□□□□ -0.82
Usp47Q8BY87 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Gm44863-201ENSMUST00000207613 1422 ntBASIC9.91□□□□□ -0.82
Usp47Q8BY87 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp47Q8BY87 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm25724-201ENSMUST00000104531 117 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm15349-201ENSMUST00000121154 204 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm42673-201ENSMUST00000202676 337 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm9315-201ENSMUST00000222696 908 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Amy2b-201ENSMUST00000120184 1577 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.9□□□□□ -0.82
Usp47Q8BY87 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp47Q8BY87 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Usp47Q8BY87 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp47Q8BY87 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp47Q8BY87 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.9□□□□□ -0.83
Usp47Q8BY87 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp47Q8BY87 Gm44704-201ENSMUST00000208963 1990 ntBASIC9.9□□□□□ -0.83
Usp47Q8BY87 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm12778-201ENSMUST00000122341 333 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm10136-201ENSMUST00000183196 435 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm27186-201ENSMUST00000184223 307 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm19480-201ENSMUST00000185547 667 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm43141-201ENSMUST00000199695 274 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 AC163660.1-201ENSMUST00000223696 818 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm26130-201ENSMUST00000083171 138 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Mir7b-201ENSMUST00000083557 111 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm5361-201ENSMUST00000211041 1498 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.89□□□□□ -0.83
Usp47Q8BY87 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp47Q8BY87 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm25093-201ENSMUST00000103993 132 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm11581-201ENSMUST00000122024 763 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm12929-201ENSMUST00000122406 370 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm23810-201ENSMUST00000175150 74 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm5119-201ENSMUST00000215858 634 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 AC124395.1-201ENSMUST00000225940 707 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms