Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm36935-201ENSMUST00000192526 292 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm18752-201ENSMUST00000192876 608 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm37689-201ENSMUST00000193139 275 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm5708-201ENSMUST00000196289 886 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm30517-201ENSMUST00000197350 772 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upk3aQ9JKX8 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm25631-201ENSMUST00000104390 130 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm14869-201ENSMUST00000119007 884 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Mir1981-201ENSMUST00000157934 82 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm28580-201ENSMUST00000186767 88 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm42804-201ENSMUST00000199701 178 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm10126-201ENSMUST00000221732 168 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upk3aQ9JKX8 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.84□□□□□ -1.32
Upk3aQ9JKX8 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upk3aQ9JKX8 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms