Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm9110-201ENSMUST00000219035 617 ntBASIC7.27□□□□□ -1.25
HttP42859 Gm9800-201ENSMUST00000052615 336 ntBASIC7.27□□□□□ -1.25
HttP42859 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.27□□□□□ -1.25
HttP42859 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
HttP42859 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
HttP42859 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
HttP42859 Gm6808-201ENSMUST00000162341 807 ntBASIC7.27□□□□□ -1.25
HttP42859 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.27□□□□□ -1.25
HttP42859 Gm37328-201ENSMUST00000193191 640 ntBASIC7.27□□□□□ -1.25
HttP42859 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.27□□□□□ -1.25
HttP42859 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HttP42859 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HttP42859 Gm24924-201ENSMUST00000084007 164 ntBASIC7.27□□□□□ -1.25
HttP42859 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HttP42859 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm13114-201ENSMUST00000117605 106 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm4997-201ENSMUST00000154056 360 ntBASIC7.26□□□□□ -1.25
HttP42859 Mir1970-201ENSMUST00000157839 104 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm23776-201ENSMUST00000158993 325 ntBASIC7.26□□□□□ -1.25
HttP42859 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.26□□□□□ -1.25
HttP42859 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HttP42859 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.26□□□□□ -1.25
HttP42859 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HttP42859 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.26□□□□□ -1.25
HttP42859 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.26□□□□□ -1.25
HttP42859 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HttP42859 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
HttP42859 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC7.26□□□□□ -1.25
HttP42859 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.26□□□□□ -1.25
HttP42859 Gm15073-201ENSMUST00000117432 634 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm16200-201ENSMUST00000120385 331 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm14237-201ENSMUST00000122080 430 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm25550-201ENSMUST00000158079 128 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm3008-201ENSMUST00000160566 571 ntBASIC7.26□□□□□ -1.25
HttP42859 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.26□□□□□ -1.25
HttP42859 Gm42580-201ENSMUST00000197223 753 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm5373-201ENSMUST00000212113 1050 ntBASIC7.26□□□□□ -1.25
HttP42859 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.26□□□□□ -1.25
HttP42859 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC7.26□□□□□ -1.25
HttP42859 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Gm43890-201ENSMUST00000203437 2799 ntBASIC7.26□□□□□ -1.25
HttP42859 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HttP42859 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HttP42859 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Gm12710-201ENSMUST00000119011 216 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm25717-201ENSMUST00000158631 353 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm2058-201ENSMUST00000178791 560 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.25□□□□□ -1.25
HttP42859 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.25□□□□□ -1.25
HttP42859 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Gm43311-201ENSMUST00000200016 2377 ntBASIC7.25□□□□□ -1.25
HttP42859 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms