Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn3Q9Z0G9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn3Q9Z0G9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn3Q9Z0G9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn3Q9Z0G9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn3Q9Z0G9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn3Q9Z0G9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn3Q9Z0G9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn3Q9Z0G9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Cldn3Q9Z0G9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn3Q9Z0G9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Cldn3Q9Z0G9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms