Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm7860-201ENSMUST00000121190 879 ntBASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cr1Q9Z0D9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cr1Q9Z0D9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cr1Q9Z0D9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Spcs1-204ENSMUST00000226782 949 ntBASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.55■□□□□ 0.08
Cx3cr1Q9Z0D9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm12922-201ENSMUST00000120626 809 ntBASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cr1Q9Z0D9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.52■□□□□ 0.08
Cx3cr1Q9Z0D9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms