Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn5Q9WVD4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn5Q9WVD4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn5Q9WVD4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn5Q9WVD4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Gm11249-201ENSMUST00000117071 859 ntBASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Clcn5Q9WVD4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Gm7860-201ENSMUST00000121190 879 ntBASIC19■□□□□ 0.63
Clcn5Q9WVD4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcn5Q9WVD4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcn5Q9WVD4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcn5Q9WVD4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Gm6433-201ENSMUST00000118634 875 ntBASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcn5Q9WVD4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Gm44549-201ENSMUST00000208351 577 ntBASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcn5Q9WVD4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Gm10231-201ENSMUST00000181584 441 ntBASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Gm10175-202ENSMUST00000208752 441 ntBASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Clcn5Q9WVD4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms