Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1aQ9QWF0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1aQ9QWF0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1aQ9QWF0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1aQ9QWF0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Chaf1aQ9QWF0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chaf1aQ9QWF0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chaf1aQ9QWF0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1aQ9QWF0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1aQ9QWF0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chaf1aQ9QWF0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms