Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco2Q9DA21 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco2Q9DA21 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Gm13168-201ENSMUST00000121771 632 ntBASIC20.66■□□□□ 0.9
Smco2Q9DA21 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Trmt13-210ENSMUST00000198454 880 ntBASIC20.66■□□□□ 0.9
Smco2Q9DA21 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.66■□□□□ 0.9
Smco2Q9DA21 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smco2Q9DA21 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smco2Q9DA21 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smco2Q9DA21 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smco2Q9DA21 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smco2Q9DA21 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.63■□□□□ 0.89
Smco2Q9DA21 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.63■□□□□ 0.89
Smco2Q9DA21 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.63■□□□□ 0.89
Smco2Q9DA21 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smco2Q9DA21 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smco2Q9DA21 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.62■□□□□ 0.89
Smco2Q9DA21 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Gm12896-201ENSMUST00000118430 226 ntBASIC20.62■□□□□ 0.89
Smco2Q9DA21 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smco2Q9DA21 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Smco2Q9DA21 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms