Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rsph9Q9D9V4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rsph9Q9D9V4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rsph9Q9D9V4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18■□□□□ 0.47
Rsph9Q9D9V4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Dio3-201ENSMUST00000097228 1449 ntBASIC18■□□□□ 0.47
Rsph9Q9D9V4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18■□□□□ 0.47
Rsph9Q9D9V4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rsph9Q9D9V4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Rsph9Q9D9V4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rsph9Q9D9V4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rsph9Q9D9V4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.96■□□□□ 0.47
Rsph9Q9D9V4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rsph9Q9D9V4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rsph9Q9D9V4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rsph9Q9D9V4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms