Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.68■□□□□ 0.58
Ndc80Q9D0F1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc80Q9D0F1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 AV356131-201ENSMUST00000206201 750 ntBASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ndc80Q9D0F1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc80Q9D0F1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.64■□□□□ 0.58
Ndc80Q9D0F1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.64■□□□□ 0.57
Ndc80Q9D0F1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc80Q9D0F1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ndc80Q9D0F1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms