Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Gm8493-201ENSMUST00000196881 489 ntBASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.93■□□□□ 0.62
Snf8Q9CZ28 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Snf8Q9CZ28 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Gm27454-201ENSMUST00000185090 204 ntBASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.91■□□□□ 0.62
Snf8Q9CZ28 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Snf8Q9CZ28 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Snf8Q9CZ28 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Snf8Q9CZ28 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Snf8Q9CZ28 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Snf8Q9CZ28 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Snf8Q9CZ28 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Snf8Q9CZ28 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Gm38205-201ENSMUST00000192243 258 ntBASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms