Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga9Q91XX9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Pcdhga9Q91XX9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.21■□□□□ 0.5
Pcdhga9Q91XX9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga9Q91XX9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga9Q91XX9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga9Q91XX9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga9Q91XX9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhga9Q91XX9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhga9Q91XX9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms