Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgc5Q91XW9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Gm15565-201ENSMUST00000118890 427 ntBASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Dio3-201ENSMUST00000097228 1449 ntBASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgc5Q91XW9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgc5Q91XW9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgc5Q91XW9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Gm10698-201ENSMUST00000182663 604 ntBASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgc5Q91XW9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Pcdhgc5Q91XW9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Pcdhgc5Q91XW9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhgc5Q91XW9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Gm11249-201ENSMUST00000117071 859 ntBASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgc5Q91XW9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.88■□□□□ 0.93
Pcdhgc5Q91XW9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms