Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb1Q8R3Z5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb1Q8R3Z5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Gm37179-201ENSMUST00000194862 823 ntBASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb1Q8R3Z5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb1Q8R3Z5 Gm9519-201ENSMUST00000206108 1337 ntBASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb1Q8R3Z5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb1Q8R3Z5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
Cacnb1Q8R3Z5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cacnb1Q8R3Z5 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC20.52■□□□□ 0.87
Cacnb1Q8R3Z5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb1Q8R3Z5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacnb1Q8R3Z5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Gm36943-201ENSMUST00000194422 282 ntBASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacnb1Q8R3Z5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacnb1Q8R3Z5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms