Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gm7290-201ENSMUST00000104990 617 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gm12918-201ENSMUST00000120234 636 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gm15710-201ENSMUST00000121821 636 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gm5075-201ENSMUST00000196916 622 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.74■□□□□ 0.43
SynpoQ8CC35 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SynpoQ8CC35 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Gm12441-201ENSMUST00000121806 588 ntBASIC17.73■□□□□ 0.43
SynpoQ8CC35 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Gm6420-201ENSMUST00000193885 723 ntBASIC17.73■□□□□ 0.43
SynpoQ8CC35 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SynpoQ8CC35 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Gm6365-201ENSMUST00000054711 744 ntBASIC17.72■□□□□ 0.43
SynpoQ8CC35 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SynpoQ8CC35 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Gm13534-201ENSMUST00000121169 513 ntBASIC17.71■□□□□ 0.43
SynpoQ8CC35 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynpoQ8CC35 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.7■□□□□ 0.42
SynpoQ8CC35 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Nespas-201ENSMUST00000143738 1083 ntBASIC17.7■□□□□ 0.42
SynpoQ8CC35 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SynpoQ8CC35 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms