Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Shisa4Q8CA71 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shisa4Q8CA71 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Shisa4Q8CA71 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shisa4Q8CA71 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shisa4Q8CA71 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Gm27275-201ENSMUST00000184318 272 ntBASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Shisa4Q8CA71 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.45■■□□□ 1.03
Shisa4Q8CA71 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Shisa4Q8CA71 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shisa4Q8CA71 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.44■■□□□ 1.02
Shisa4Q8CA71 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Shisa4Q8CA71 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.44■■□□□ 1.02
Shisa4Q8CA71 Dio3-201ENSMUST00000097228 1449 ntBASIC21.44■■□□□ 1.02
Shisa4Q8CA71 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shisa4Q8CA71 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Gm37856-201ENSMUST00000191634 999 ntBASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shisa4Q8CA71 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Gm12896-201ENSMUST00000118430 226 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms