Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cfap54Q8C6S9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Cfap54Q8C6S9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cfap54Q8C6S9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.77■□□□□ 0.43
Cfap54Q8C6S9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cfap54Q8C6S9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cfap54Q8C6S9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Timm23-208ENSMUST00000226683 750 ntBASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cfap54Q8C6S9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cfap54Q8C6S9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Gm9103-201ENSMUST00000119371 405 ntBASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cfap54Q8C6S9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Gm18959-201ENSMUST00000208954 655 ntBASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.71■□□□□ 0.43
Cfap54Q8C6S9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap54Q8C6S9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap54Q8C6S9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap54Q8C6S9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms