Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tsen54Q8C2A2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.37■□□□□ 0.05
Tsen54Q8C2A2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.36■□□□□ 0.05
Tsen54Q8C2A2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tsen54Q8C2A2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tsen54Q8C2A2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Tsen54Q8C2A2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tsen54Q8C2A2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.33■□□□□ 0.05
Tsen54Q8C2A2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.33■□□□□ 0.04
Tsen54Q8C2A2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms