Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scfd1Q8BRF7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.08■□□□□ 0.97
Scfd1Q8BRF7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Scfd1Q8BRF7 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.08■□□□□ 0.97
Scfd1Q8BRF7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Gm38285-201ENSMUST00000192928 922 ntBASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scfd1Q8BRF7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scfd1Q8BRF7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Scfd1Q8BRF7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scfd1Q8BRF7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Gm10138-203ENSMUST00000206952 366 ntBASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scfd1Q8BRF7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Mir6982-201ENSMUST00000184354 68 ntBASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scfd1Q8BRF7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scfd1Q8BRF7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scfd1Q8BRF7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scfd1Q8BRF7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 BC021767-201ENSMUST00000126387 1716 ntBASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Mir1199-201ENSMUST00000117015 119 ntBASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms