Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Suds3Q8BR65 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Gm37179-201ENSMUST00000194862 823 ntBASIC18.82■□□□□ 0.6
Suds3Q8BR65 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Suds3Q8BR65 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Suds3Q8BR65 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.81■□□□□ 0.6
Suds3Q8BR65 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Suds3Q8BR65 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.8■□□□□ 0.6
Suds3Q8BR65 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Suds3Q8BR65 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.79■□□□□ 0.6
Suds3Q8BR65 Gm7514-201ENSMUST00000209475 934 ntBASIC18.79■□□□□ 0.6
Suds3Q8BR65 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Suds3Q8BR65 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Suds3Q8BR65 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Suds3Q8BR65 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 BC021767-201ENSMUST00000126387 1716 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms