Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.24□□□□□ -0.13
Nhlrc1Q8BR37 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Gm12896-201ENSMUST00000118430 226 ntBASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Gm44549-201ENSMUST00000208351 577 ntBASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc1Q8BR37 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc1Q8BR37 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Gm10252-201ENSMUST00000209541 832 ntBASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Dio3-201ENSMUST00000097228 1449 ntBASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nhlrc1Q8BR37 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nhlrc1Q8BR37 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.21□□□□□ -0.14
Nhlrc1Q8BR37 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nhlrc1Q8BR37 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc1Q8BR37 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc1Q8BR37 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms