Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smco3Q8BQM7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smco3Q8BQM7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.21■□□□□ 0.02
Smco3Q8BQM7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smco3Q8BQM7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smco3Q8BQM7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smco3Q8BQM7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smco3Q8BQM7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smco3Q8BQM7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smco3Q8BQM7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms