Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Prpf18Q8BM39 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Gm43137-201ENSMUST00000198052 594 ntBASIC17.47■□□□□ 0.39
Prpf18Q8BM39 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf18Q8BM39 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf18Q8BM39 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Spcs1-204ENSMUST00000226782 949 ntBASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf18Q8BM39 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf18Q8BM39 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf18Q8BM39 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Serp2-204ENSMUST00000228055 705 ntBASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Prpf18Q8BM39 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms