Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ctr9Q62018 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ctr9Q62018 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ctr9Q62018 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ctr9Q62018 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.66■■□□□ 1.06
Ctr9Q62018 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ctr9Q62018 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.66■■□□□ 1.06
Ctr9Q62018 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ctr9Q62018 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.65■■□□□ 1.06
Ctr9Q62018 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Ctr9Q62018 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ctr9Q62018 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ctr9Q62018 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctr9Q62018 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ctr9Q62018 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ctr9Q62018 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.64■■□□□ 1.05
Ctr9Q62018 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ctr9Q62018 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctr9Q62018 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.63■■□□□ 1.05
Ctr9Q62018 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Ctr9Q62018 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctr9Q62018 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.62■■□□□ 1.05
Ctr9Q62018 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ctr9Q62018 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ctr9Q62018 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Gm13168-201ENSMUST00000121771 632 ntBASIC21.61■■□□□ 1.05
Ctr9Q62018 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Gm8520-201ENSMUST00000186517 868 ntBASIC21.61■■□□□ 1.05
Ctr9Q62018 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.61■■□□□ 1.05
Ctr9Q62018 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctr9Q62018 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm11249-201ENSMUST00000117071 859 ntBASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm22325-201ENSMUST00000158904 308 ntBASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm22240-201ENSMUST00000175225 82 ntBASIC21.6■■□□□ 1.05
Ctr9Q62018 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.6■■□□□ 1.05
Ctr9Q62018 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ctr9Q62018 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.6■■□□□ 1.05
Ctr9Q62018 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ctr9Q62018 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctr9Q62018 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ctr9Q62018 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.59■■□□□ 1.05
Ctr9Q62018 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.59■■□□□ 1.05
Ctr9Q62018 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.59■■□□□ 1.05
Ctr9Q62018 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ctr9Q62018 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ctr9Q62018 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.59■■□□□ 1.05
Ctr9Q62018 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ctr9Q62018 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ctr9Q62018 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.59■■□□□ 1.05
Ctr9Q62018 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.58■■□□□ 1.05
Ctr9Q62018 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms