Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sim1Q61045 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Golph3-205ENSMUST00000228671 2842 ntBASIC18.21■□□□□ 0.51
Sim1Q61045 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sim1Q61045 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sim1Q61045 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.21■□□□□ 0.51
Sim1Q61045 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.21■□□□□ 0.51
Sim1Q61045 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sim1Q61045 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.21■□□□□ 0.51
Sim1Q61045 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Sim1Q61045 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.21■□□□□ 0.5
Sim1Q61045 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sim1Q61045 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sim1Q61045 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sim1Q61045 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.2■□□□□ 0.5
Sim1Q61045 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sim1Q61045 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sim1Q61045 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.19■□□□□ 0.5
Sim1Q61045 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.19■□□□□ 0.5
Sim1Q61045 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sim1Q61045 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Sim1Q61045 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.19■□□□□ 0.5
Sim1Q61045 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sim1Q61045 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Sim1Q61045 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sim1Q61045 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sim1Q61045 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sim1Q61045 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sim1Q61045 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sim1Q61045 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Sim1Q61045 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.18■□□□□ 0.5
Sim1Q61045 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.18■□□□□ 0.5
Sim1Q61045 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.18■□□□□ 0.5
Sim1Q61045 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
Sim1Q61045 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sim1Q61045 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Gm11643-201ENSMUST00000119578 864 ntBASIC18.17■□□□□ 0.5
Sim1Q61045 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.17■□□□□ 0.5
Sim1Q61045 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Sim1Q61045 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sim1Q61045 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms