Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-1Q5R1I8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-1Q5R1I8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Gm43863-201ENSMUST00000203822 1192 ntBASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-1Q5R1I8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-1Q5R1I8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-1Q5R1I8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-1Q5R1I8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trav3-1Q5R1I8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav3-1Q5R1I8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-1Q5R1I8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-1Q5R1I8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms