Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1d1Q3UV55 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Nr1d1Q3UV55 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Gm27405-201ENSMUST00000184201 112 ntBASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Gm40848-201ENSMUST00000221998 324 ntBASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Nr1d1Q3UV55 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Gm43060-201ENSMUST00000200621 289 ntBASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Gm10493-201ENSMUST00000097270 612 ntBASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nr1d1Q3UV55 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nr1d1Q3UV55 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Nr1d1Q3UV55 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Fst-202ENSMUST00000223640 2612 ntBASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nr1d1Q3UV55 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Gm10849-201ENSMUST00000100397 618 ntBASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Gm42642-201ENSMUST00000200683 355 ntBASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nr1d1Q3UV55 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nr1d1Q3UV55 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms