Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cks1brtQ3UNC9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cks1brtQ3UNC9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cks1brtQ3UNC9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cks1brtQ3UNC9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Mir6236-201ENSMUST00000184437 123 ntBASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cks1brtQ3UNC9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cks1brtQ3UNC9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Gm11687-201ENSMUST00000118911 886 ntBASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms