Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrra1Q3U3V8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrra1Q3U3V8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Xrra1Q3U3V8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.53■□□□□ 0.4
Xrra1Q3U3V8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrra1Q3U3V8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrra1Q3U3V8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms